Borrow it
Coverart for item
The Resource Bioinformatics research and applications : 10th International Symposium, ISBRA 2014, Zhangjiajie, China, June 28-30, 2014 : proceedings, Mitra Basu, Yi Pan, Jianxin Wang (Eds.)

Bioinformatics research and applications : 10th International Symposium, ISBRA 2014, Zhangjiajie, China, June 28-30, 2014 : proceedings, Mitra Basu, Yi Pan, Jianxin Wang (Eds.)

Creator
Editor
Contributor
Summary
This book constitutes the refereed proceedings of the 10th International Symposium on Bioinformatics Research and Applications, ISBRA 2014, held in Zhangjiajie, China, in June 2014. The 33 revised full papers and 31 one-page abstracts included in this volume were carefully reviewed and selected from 119 submissions. The papers cover a wide range of topics in bioinformatics and computational biology and their applications including the development of experimental or commercial systems
Language
eng
Work
Publication
Extent
1 online resource (xviii, 409 pages)
Note
International conference proceedings
Contents
  • Predicting Disease Risks Using Feature Selection Based on Random Forest and Support Vector Machine
  • Phylogenetic Bias in the Likelihood Method Caused by Missing Data Coupled with Among-Site Rate Variation: An Analytical Approach
  • An Eigen decomposition Method for Protein Structure Alignment
  • Functional Interplay between Hemagglutinin and Neuraminidase of Pandemic 2009 H1N1 from the Perspective of Virus Evolution
  • Predicting Protein Submitochondrial Locations Using a K-Nearest Neighbors Method Based on the Bit-Score Weighted Euclidean Distance
  • Algorithms Implemented for Cancer Gene Searching and Classifications
  • Dysregulated microRNA Profile in HeLa Cell Lines Induced by Lupeol
  • A Simulation for Proportional Biological Operational Mu-Circuit
  • Computational Prediction of Human Saliva-Secreted Proteins
  • A Parallel Scheme for Three-Dimensional Reconstruction in Large-Field Electron Tomography
  • An Improved Correlation Method Based on Rotation Invariant Feature for Automatic Particle Selection
  • An Effective Algorithm for Peptide de novo Sequencing from Mixture MS/MS Spectra
  • Identifying Spurious Interactions in the Protein-Protein Interaction Networks Using Local Similarity Preserving Embedding
  • Multiple RNA Interaction with Sub-optimal Solutions
  • Application of Consensus String Matching in the Diagnosis of Allelic Heterogeneity (Extended Abstract)
  • Continuous Time Bayesian Networks for Gene Network Reconstruction: A Comparative Study on Time Course Data
  • Drug Target Identification Based on Structural Output Controllability of Complex Networks
  • NovoGMET: De Novo Peptide Sequencing Using Graphs with Multiple Edge Types (GMET) for ETD/ECD Spectra
  • Duplication Cost Diameters
  • Computational Identification of De-Centric Genetic Regulatory Relationships from Functional Genomic Data
  • Classification of Mutations by Functional Impact Type: Gain of Function, Loss of Function and Switch of Function
  • Network Analysis of Human Disease Comorbidity Patterns Based on Large-Scale Data Mining
  • Identification of Essential Proteins by Using Complexes and Interaction Network
  • GenoScan: Genomic Scanner for Putative miRNA Precursors
  • Searching SNP Combinations Related to Evolutionary Information of Human Populations on HapMap Data
  • 2D Pharmacophore Query Generation
  • Structure-Based Analysis of Protein Binding Pockets Using Von Neumann Entropy
  • A New Mathematical Model for Inbreeding Depression in Large Populations
  • dSpliceType: A Multivariate Model for Detecting Various Types of Differential Splicing Events Using RNA-Seq
  • Conformational Transitions and Principal Geodesic Analysis on the Positive Semidefinite Matrix Manifold
  • Joint Analysis of Functional and Phylogenetic Composition for Human Microbiome Data
  • schematikon: Detailed Sequence-Structure Relationships from Mining a Non-redundant Protein Structure Database (Extended Abstract)
  • PNImodeler: Web Server for Inferring Protein Binding Nucleotides from Sequence Data
  • A MCI Decision Support System Based on Ontology
  • Context Similarity Based Feature Selection Methods for Protein Interaction Article Classification
  • Network Propagation Reveals Novel Genetic Features Predicting Drug Response of Cancer Cell Lines
  • Splice Site Prediction Using Support Vector Machine with Markov Model and Codon Information
  • Exploiting Topic Modeling to Boost Metagenomic Sequences Binning
  • Network-Based Method for Identifying Overlapping Mutated Driver Pathways in Cancer
  • Completing a Bacterial Genome with in silico and Wet Lab Approaches
  • Protein Function Prediction: A Global Prediction Method with Multiple Data Sources
  • A microRNA-Gene Network in Ovarian Cancer from Genome-Wide QTL Analysis
  • K-Profiles Nonlinear Clustering
  • Estrogen Induced RNA Polymerase II Stalling in Breast Cancer Cell Line MCF7
  • A Knowledge-Driven Approach in Constructing a Large-Scale Drug-Side Effect Relationship Knowledge Base for Computational Drug Discovery
  • Systems Biology Approach to Understand Seed Composition
  • Prediction of the Cooperative cis-regulatory Elements for Broadly Expressed Neuronal Genes in Caenorhabditis Elegans
  • Improving the Mapping of the Smith-Waterman Sequence Database Search Algorithm onto CUDA GPUs
  • VFP: A Visual Tool for Predicting Gene-Fusion Base on Analyzing Single-end RNA-Sequence
  • A Novel Method for Identifying Essential Proteins from Active PPI Networks
  • RAUR: Re-alignment of Unmapped Reads with Base Quality Score
  • PIGS: Improved Estimates of Identity-by-Descent Probabilities by Probabilistic IBD Graph Sampling
  • Clustering PPI Data through Improved Synchronization-Based Hierarchical Clustering Method
  • Order Decay in Transcription Regulation in Type 1 Diabetes
  • Simulated Regression Algorithm for Transcriptome Quantification
Isbn
9783319081717
Instance
Label
Bioinformatics research and applications : 10th International Symposium, ISBRA 2014, Zhangjiajie, China, June 28-30, 2014 : proceedings
Title
Bioinformatics research and applications
Title remainder
10th International Symposium, ISBRA 2014, Zhangjiajie, China, June 28-30, 2014 : proceedings
Statement of responsibility
Mitra Basu, Yi Pan, Jianxin Wang (Eds.)
Title variation
ISBRA 2014
Creator
Contributor
Editor
Subject
Genre
Language
eng
Summary
This book constitutes the refereed proceedings of the 10th International Symposium on Bioinformatics Research and Applications, ISBRA 2014, held in Zhangjiajie, China, in June 2014. The 33 revised full papers and 31 one-page abstracts included in this volume were carefully reviewed and selected from 119 submissions. The papers cover a wide range of topics in bioinformatics and computational biology and their applications including the development of experimental or commercial systems
Member of
Cataloging source
NLGGC
Dewey number
570.285
Illustrations
illustrations
Index
index present
LC call number
QH324.2
Literary form
non fiction
http://bibfra.me/vocab/lite/meetingDate
2014
http://bibfra.me/vocab/lite/meetingName
ISBRA (Conference)
Nature of contents
  • dictionaries
  • bibliography
http://library.link/vocab/relatedWorkOrContributorName
  • Basu, Mitra
  • Pan, Yi
  • Wang, Jianxin
Series statement
  • Lecture notes in bioinformatics,
  • LNCS sublibrary. SL 8, Bioinformatics
Series volume
8492
http://library.link/vocab/subjectName
  • Bioinformatics
  • Bioinformatics
Label
Bioinformatics research and applications : 10th International Symposium, ISBRA 2014, Zhangjiajie, China, June 28-30, 2014 : proceedings, Mitra Basu, Yi Pan, Jianxin Wang (Eds.)
Instantiates
Publication
Copyright
Note
International conference proceedings
Bibliography note
Includes bibliographical references and author index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
Predicting Disease Risks Using Feature Selection Based on Random Forest and Support Vector Machine -- Phylogenetic Bias in the Likelihood Method Caused by Missing Data Coupled with Among-Site Rate Variation: An Analytical Approach -- An Eigen decomposition Method for Protein Structure Alignment -- Functional Interplay between Hemagglutinin and Neuraminidase of Pandemic 2009 H1N1 from the Perspective of Virus Evolution -- Predicting Protein Submitochondrial Locations Using a K-Nearest Neighbors Method Based on the Bit-Score Weighted Euclidean Distance -- Algorithms Implemented for Cancer Gene Searching and Classifications -- Dysregulated microRNA Profile in HeLa Cell Lines Induced by Lupeol -- A Simulation for Proportional Biological Operational Mu-Circuit -- Computational Prediction of Human Saliva-Secreted Proteins -- A Parallel Scheme for Three-Dimensional Reconstruction in Large-Field Electron Tomography -- An Improved Correlation Method Based on Rotation Invariant Feature for Automatic Particle Selection -- An Effective Algorithm for Peptide de novo Sequencing from Mixture MS/MS Spectra -- Identifying Spurious Interactions in the Protein-Protein Interaction Networks Using Local Similarity Preserving Embedding -- Multiple RNA Interaction with Sub-optimal Solutions -- Application of Consensus String Matching in the Diagnosis of Allelic Heterogeneity (Extended Abstract) -- Continuous Time Bayesian Networks for Gene Network Reconstruction: A Comparative Study on Time Course Data -- Drug Target Identification Based on Structural Output Controllability of Complex Networks -- NovoGMET: De Novo Peptide Sequencing Using Graphs with Multiple Edge Types (GMET) for ETD/ECD Spectra -- Duplication Cost Diameters -- Computational Identification of De-Centric Genetic Regulatory Relationships from Functional Genomic Data -- Classification of Mutations by Functional Impact Type: Gain of Function, Loss of Function and Switch of Function -- Network Analysis of Human Disease Comorbidity Patterns Based on Large-Scale Data Mining -- Identification of Essential Proteins by Using Complexes and Interaction Network -- GenoScan: Genomic Scanner for Putative miRNA Precursors -- Searching SNP Combinations Related to Evolutionary Information of Human Populations on HapMap Data -- 2D Pharmacophore Query Generation -- Structure-Based Analysis of Protein Binding Pockets Using Von Neumann Entropy -- A New Mathematical Model for Inbreeding Depression in Large Populations -- dSpliceType: A Multivariate Model for Detecting Various Types of Differential Splicing Events Using RNA-Seq -- Conformational Transitions and Principal Geodesic Analysis on the Positive Semidefinite Matrix Manifold -- Joint Analysis of Functional and Phylogenetic Composition for Human Microbiome Data -- schematikon: Detailed Sequence-Structure Relationships from Mining a Non-redundant Protein Structure Database (Extended Abstract) -- PNImodeler: Web Server for Inferring Protein Binding Nucleotides from Sequence Data -- A MCI Decision Support System Based on Ontology -- Context Similarity Based Feature Selection Methods for Protein Interaction Article Classification -- Network Propagation Reveals Novel Genetic Features Predicting Drug Response of Cancer Cell Lines -- Splice Site Prediction Using Support Vector Machine with Markov Model and Codon Information -- Exploiting Topic Modeling to Boost Metagenomic Sequences Binning -- Network-Based Method for Identifying Overlapping Mutated Driver Pathways in Cancer -- Completing a Bacterial Genome with in silico and Wet Lab Approaches -- Protein Function Prediction: A Global Prediction Method with Multiple Data Sources -- A microRNA-Gene Network in Ovarian Cancer from Genome-Wide QTL Analysis -- K-Profiles Nonlinear Clustering -- Estrogen Induced RNA Polymerase II Stalling in Breast Cancer Cell Line MCF7 -- A Knowledge-Driven Approach in Constructing a Large-Scale Drug-Side Effect Relationship Knowledge Base for Computational Drug Discovery -- Systems Biology Approach to Understand Seed Composition -- Prediction of the Cooperative cis-regulatory Elements for Broadly Expressed Neuronal Genes in Caenorhabditis Elegans -- Improving the Mapping of the Smith-Waterman Sequence Database Search Algorithm onto CUDA GPUs -- VFP: A Visual Tool for Predicting Gene-Fusion Base on Analyzing Single-end RNA-Sequence -- A Novel Method for Identifying Essential Proteins from Active PPI Networks -- RAUR: Re-alignment of Unmapped Reads with Base Quality Score -- PIGS: Improved Estimates of Identity-by-Descent Probabilities by Probabilistic IBD Graph Sampling -- Clustering PPI Data through Improved Synchronization-Based Hierarchical Clustering Method -- Order Decay in Transcription Regulation in Type 1 Diabetes -- Simulated Regression Algorithm for Transcriptome Quantification
Control code
882280409
Extent
1 online resource (xviii, 409 pages)
Form of item
online
Isbn
9783319081717
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other control number
10.1007/978-3-319-08171-7
Other physical details
illustrations
Specific material designation
remote
System control number
(OCoLC)882280409
Label
Bioinformatics research and applications : 10th International Symposium, ISBRA 2014, Zhangjiajie, China, June 28-30, 2014 : proceedings, Mitra Basu, Yi Pan, Jianxin Wang (Eds.)
Publication
Copyright
Note
International conference proceedings
Bibliography note
Includes bibliographical references and author index
Carrier category
online resource
Carrier category code
  • cr
Carrier MARC source
rdacarrier
Content category
text
Content type code
  • txt
Content type MARC source
rdacontent
Contents
Predicting Disease Risks Using Feature Selection Based on Random Forest and Support Vector Machine -- Phylogenetic Bias in the Likelihood Method Caused by Missing Data Coupled with Among-Site Rate Variation: An Analytical Approach -- An Eigen decomposition Method for Protein Structure Alignment -- Functional Interplay between Hemagglutinin and Neuraminidase of Pandemic 2009 H1N1 from the Perspective of Virus Evolution -- Predicting Protein Submitochondrial Locations Using a K-Nearest Neighbors Method Based on the Bit-Score Weighted Euclidean Distance -- Algorithms Implemented for Cancer Gene Searching and Classifications -- Dysregulated microRNA Profile in HeLa Cell Lines Induced by Lupeol -- A Simulation for Proportional Biological Operational Mu-Circuit -- Computational Prediction of Human Saliva-Secreted Proteins -- A Parallel Scheme for Three-Dimensional Reconstruction in Large-Field Electron Tomography -- An Improved Correlation Method Based on Rotation Invariant Feature for Automatic Particle Selection -- An Effective Algorithm for Peptide de novo Sequencing from Mixture MS/MS Spectra -- Identifying Spurious Interactions in the Protein-Protein Interaction Networks Using Local Similarity Preserving Embedding -- Multiple RNA Interaction with Sub-optimal Solutions -- Application of Consensus String Matching in the Diagnosis of Allelic Heterogeneity (Extended Abstract) -- Continuous Time Bayesian Networks for Gene Network Reconstruction: A Comparative Study on Time Course Data -- Drug Target Identification Based on Structural Output Controllability of Complex Networks -- NovoGMET: De Novo Peptide Sequencing Using Graphs with Multiple Edge Types (GMET) for ETD/ECD Spectra -- Duplication Cost Diameters -- Computational Identification of De-Centric Genetic Regulatory Relationships from Functional Genomic Data -- Classification of Mutations by Functional Impact Type: Gain of Function, Loss of Function and Switch of Function -- Network Analysis of Human Disease Comorbidity Patterns Based on Large-Scale Data Mining -- Identification of Essential Proteins by Using Complexes and Interaction Network -- GenoScan: Genomic Scanner for Putative miRNA Precursors -- Searching SNP Combinations Related to Evolutionary Information of Human Populations on HapMap Data -- 2D Pharmacophore Query Generation -- Structure-Based Analysis of Protein Binding Pockets Using Von Neumann Entropy -- A New Mathematical Model for Inbreeding Depression in Large Populations -- dSpliceType: A Multivariate Model for Detecting Various Types of Differential Splicing Events Using RNA-Seq -- Conformational Transitions and Principal Geodesic Analysis on the Positive Semidefinite Matrix Manifold -- Joint Analysis of Functional and Phylogenetic Composition for Human Microbiome Data -- schematikon: Detailed Sequence-Structure Relationships from Mining a Non-redundant Protein Structure Database (Extended Abstract) -- PNImodeler: Web Server for Inferring Protein Binding Nucleotides from Sequence Data -- A MCI Decision Support System Based on Ontology -- Context Similarity Based Feature Selection Methods for Protein Interaction Article Classification -- Network Propagation Reveals Novel Genetic Features Predicting Drug Response of Cancer Cell Lines -- Splice Site Prediction Using Support Vector Machine with Markov Model and Codon Information -- Exploiting Topic Modeling to Boost Metagenomic Sequences Binning -- Network-Based Method for Identifying Overlapping Mutated Driver Pathways in Cancer -- Completing a Bacterial Genome with in silico and Wet Lab Approaches -- Protein Function Prediction: A Global Prediction Method with Multiple Data Sources -- A microRNA-Gene Network in Ovarian Cancer from Genome-Wide QTL Analysis -- K-Profiles Nonlinear Clustering -- Estrogen Induced RNA Polymerase II Stalling in Breast Cancer Cell Line MCF7 -- A Knowledge-Driven Approach in Constructing a Large-Scale Drug-Side Effect Relationship Knowledge Base for Computational Drug Discovery -- Systems Biology Approach to Understand Seed Composition -- Prediction of the Cooperative cis-regulatory Elements for Broadly Expressed Neuronal Genes in Caenorhabditis Elegans -- Improving the Mapping of the Smith-Waterman Sequence Database Search Algorithm onto CUDA GPUs -- VFP: A Visual Tool for Predicting Gene-Fusion Base on Analyzing Single-end RNA-Sequence -- A Novel Method for Identifying Essential Proteins from Active PPI Networks -- RAUR: Re-alignment of Unmapped Reads with Base Quality Score -- PIGS: Improved Estimates of Identity-by-Descent Probabilities by Probabilistic IBD Graph Sampling -- Clustering PPI Data through Improved Synchronization-Based Hierarchical Clustering Method -- Order Decay in Transcription Regulation in Type 1 Diabetes -- Simulated Regression Algorithm for Transcriptome Quantification
Control code
882280409
Extent
1 online resource (xviii, 409 pages)
Form of item
online
Isbn
9783319081717
Media category
computer
Media MARC source
rdamedia
Media type code
  • c
Other control number
10.1007/978-3-319-08171-7
Other physical details
illustrations
Specific material designation
remote
System control number
(OCoLC)882280409

Subject

Genre

Member of

Library Locations

    • Thomas Jefferson LibraryBorrow it
      1 University Blvd, St. Louis, MO, 63121, US
      38.710138 -90.311107

Library Links

Structured data from the Bibframe namespace is licensed under the Creative Commons Attribution 4.0 International License by University of Missouri-St. Louis Libraries. Additional terms may apply to data associated with third party namespaces.
Processing Feedback ...